Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure

نویسندگان

  • Kliment Olechnovic
  • Mindaugas Margelevicius
  • Ceslovas Venclovas
چکیده

UNLABELLED We present Voroprot, an interactive cross-platform software tool that provides a unique set of capabilities for exploring geometric features of protein structure. Voroprot allows the construction and visualization of the Apollonius diagram (also known as the additively weighted Voronoi diagram), the Apollonius graph, protein alpha shapes, interatomic contact surfaces, solvent accessible surfaces, pockets and cavities inside protein structure. AVAILABILITY Voroprot is available for Windows, Linux and Mac OS X operating systems and can be downloaded from http://www.ibt.lt/bioinformatics/voroprot/.

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عنوان ژورنال:
  • Bioinformatics

دوره 27 5  شماره 

صفحات  -

تاریخ انتشار 2011